BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021H06LP1|AL427829
(915 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1097 1548 0.0
>3x_Contig1097
Length = 4271
Score = 1548 bits (779), Expect = 0.0
Identities = 796/799 (99%), Gaps = 2/799 (0%)
Strand = Plus / Minus
Query: 1 gatctctttcttcaaagcagaaactttaccgatttgcttgtaaataacagtttcgtcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1130 gatctctttcttcaaagcagaaactttaccgatttgcttgtaaataacagtttcgtcttc 1071
Query: 61 tctgtcaccatcaatagcaataccagtagagtcataccctctgtactctaatctctgcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1070 tctgtcaccatcaatagcaataccagtagagtcataccctctgtactctaatctctgcaa 1011
Query: 121 accttccactaaagtatcgatgatctcgccacgagatttctcaactaaaaaattacaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1010 accttccactaaagtatcgatgatctcgccacgagatttctcaactaaaaaattacaata 951
Query: 181 accaaagataccacacattctatcgcgttcctaaactatcttgcctcagcgtcttttcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 950 accaaagataccacacattctatcgcgttcctaaactatcttgcctcagcgtcttttcta 891
Query: 241 atgctaccgctggaacactttagagttactggatcctttgttagcttctttcctttcgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 atgctaccgctggaacactttagagttactggatcctttgttagcttctttcctttcgaa 831
Query: 301 cgcttggcataaaaccctgagtgaataagtccagtttatatttataccatatgtgttctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 cgcttggcataaaaccctgagtgaataagtccagtttatatttataccatatgtgttctt 771
Query: 361 tatttatataacacaaaaatttttttgttactataattaccagttttagaaatgtaaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 tatttatataacacaaaaatttttttgttactataattaccagttttagaaatgtaaata 711
Query: 421 cagtgtgatccataaaggcttgaaacagagaagaccaaaggaccagaggtttgagttgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 cagtgtgatccataaaggcttgaaacagagaagaccaaaggaccagaggtttgagttgtc 651
Query: 481 ctgatggaggttgtgattcgtagggccatcctgtatctggtgtaactggtatagttttgt 540
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ctgatggaggttgtaattcgtagggccatcctgtatctggtgtaactggtatagttttgt 591
Query: 541 tatgtagtactatgatgaggtatgaattgcatgtctttgcgctatacagattcatagttc 600
||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 590 tatgtagtactatgatgaggtatgaattgcatgtctttgcg-tata-agattcatagttc 533
Query: 601 aaattcagacatgtgggcccaattcattaggacgatcatatttcagtaagattagtaacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 aaattcagacatgtgggcccaattcattaggacgatcatatttcagtaagattagtaacc 473
Query: 661 gtagtaggggtttatagaaatggaggtgagttatgattttaatcacaaatcaccaaagga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gtagtaggggtttatagaaatggaggtgagttatgattttaatcacaaatcaccaaagga 413
Query: 721 ttggtagacttggttccagtcgttgtagaatccgttaaagaatttaactgccaagccgat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ttggtagacttggttccagtcgttgtagaatccgttaaagaatttaactgccaagccgat 353
Query: 781 atctttactaccagttgta 799
|||||||||||||||||||
Sbjct: 352 atctttactaccagttgta 334
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6741
Number of Sequences: 1807
Number of extensions: 6741
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 915
length of database: 10,358,551
effective HSP length: 16
effective length of query: 899
effective length of database: 10,329,639
effective search space: 9286345461
effective search space used: 9286345461
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)